PanVA

An interactive visualization tool for pangenomic variant analysis

Demos

Getting Started

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Linked highlighting

Easily trace sequences and corresponding metadata through linked highlighting.

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Sorting & clustering

Discover patterns between sequences and phenotypes through various sorting options.

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Grouping & aggregation

Create groups show aggregate values to draw comparisons and save screen space.

PanVA is web application allowing users to visually and interatively explore sequence variants in pangenomes. It provides context for these variants by displaying their corresponding annotations, phylogenetic and phenotypic information. The source code is available on GitHub.